STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL76276.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (261 aa)    
Predicted Functional Partners:
KPL78574.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.901
KPL75860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.901
KPL72469.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.901
KPL70812.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.901
KPL74470.1
Beta-phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.840
KPL74471.1
Kojibiose phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.840
KPL74909.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.785
KPL76274.1
ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KPL76275.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
glgA
Hypothetical protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 
 0.735
Your Current Organism:
Bellilinea caldifistulae
NCBI taxonomy Id: 360411
Other names: B. caldifistulae, Bellilinea caldifistulae Yamada et al. 2007, DSM 17877, JCM 13669, anaerobic filamentous bacterium GOMI-1, strain GOMI-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.