STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP12285.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component. (373 aa)    
Predicted Functional Partners:
GAP12284.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 
 0.985
GAP12283.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
 
  0.982
GAP12282.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
 
  0.981
GAP12286.1
Bacterial extracellular solute-binding proteins, family 5 Middle.
 
  
  0.935
GAP12289.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.930
GAP13005.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.929
GAP13737.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 
 0.926
GAP13685.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 
 0.925
GAP15801.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.922
GAP13738.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
 
  0.906
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.