Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAP12296.1 | GAP12297.1 | LARV_00028 | LARV_00029 | Hypothetical protein. | Cell wall-associated hydrolase. | 0.448 |
| GAP12296.1 | GAP12298.1 | LARV_00028 | LARV_00030 | Hypothetical protein. | L-alanine-DL-glutamate epimerase. | 0.407 |
| GAP12297.1 | GAP12296.1 | LARV_00029 | LARV_00028 | Cell wall-associated hydrolase. | Hypothetical protein. | 0.448 |
| GAP12297.1 | GAP12298.1 | LARV_00029 | LARV_00030 | Cell wall-associated hydrolase. | L-alanine-DL-glutamate epimerase. | 0.854 |
| GAP12297.1 | GAP12300.1 | LARV_00029 | LARV_00032 | Cell wall-associated hydrolase. | Cell division protein FtsI/penicillin-binding protein 2. | 0.756 |
| GAP12297.1 | GAP12301.1 | LARV_00029 | LARV_00033 | Cell wall-associated hydrolase. | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.576 |
| GAP12297.1 | GAP12826.1 | LARV_00029 | LARV_00566 | Cell wall-associated hydrolase. | Protein containg TPR repeat. | 0.432 |
| GAP12297.1 | GAP13585.1 | LARV_00029 | LARV_01340 | Cell wall-associated hydrolase. | Protein containg PAS domain S-box. | 0.436 |
| GAP12297.1 | GAP14096.1 | LARV_00029 | LARV_01858 | Cell wall-associated hydrolase. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.564 |
| GAP12297.1 | GAP15587.1 | LARV_00029 | LARV_03378 | Cell wall-associated hydrolase. | Uncharacterized protein conserved in bacteria. | 0.490 |
| GAP12297.1 | murI | LARV_00029 | LARV_03184 | Cell wall-associated hydrolase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.526 |
| GAP12297.1 | rsgA | LARV_00029 | LARV_00031 | Cell wall-associated hydrolase. | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.721 |
| GAP12298.1 | GAP12296.1 | LARV_00030 | LARV_00028 | L-alanine-DL-glutamate epimerase. | Hypothetical protein. | 0.407 |
| GAP12298.1 | GAP12297.1 | LARV_00030 | LARV_00029 | L-alanine-DL-glutamate epimerase. | Cell wall-associated hydrolase. | 0.854 |
| GAP12298.1 | GAP12300.1 | LARV_00030 | LARV_00032 | L-alanine-DL-glutamate epimerase. | Cell division protein FtsI/penicillin-binding protein 2. | 0.711 |
| GAP12298.1 | GAP12301.1 | LARV_00030 | LARV_00033 | L-alanine-DL-glutamate epimerase. | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.628 |
| GAP12298.1 | rsgA | LARV_00030 | LARV_00031 | L-alanine-DL-glutamate epimerase. | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.725 |
| GAP12300.1 | GAP12297.1 | LARV_00032 | LARV_00029 | Cell division protein FtsI/penicillin-binding protein 2. | Cell wall-associated hydrolase. | 0.756 |
| GAP12300.1 | GAP12298.1 | LARV_00032 | LARV_00030 | Cell division protein FtsI/penicillin-binding protein 2. | L-alanine-DL-glutamate epimerase. | 0.711 |
| GAP12300.1 | GAP12301.1 | LARV_00032 | LARV_00033 | Cell division protein FtsI/penicillin-binding protein 2. | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.724 |
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