STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP12451.1Glycosyltransferase. (492 aa)    
Predicted Functional Partners:
GAP14828.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
 
 0.783
GAP13112.1
Hypothetical protein.
  
 
 0.773
GAP14126.1
Predicted xylanase/chitin deacetylase.
  
 
 0.773
GAP14497.1
Predicted xylanase/chitin deacetylase.
  
 
 0.773
GAP12613.1
Hypothetical protein.
  
 
  0.752
GAP14421.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
 
 0.727
GAP12826.1
Protein containg TPR repeat.
  
 
 0.726
GAP12844.1
Protein containg TPR repeat.
  
 
 0.726
GAP13476.1
Predicted glycosyltransferases.
    
 0.714
GAP12676.1
Protein containg AAA ATPase domain.
  
 
 0.713
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.