STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP12518.1Hypothetical protein. (616 aa)    
Predicted Functional Partners:
GAP14592.1
Folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family.
  
    0.776
GAP15606.1
Polyketide synthase module.
  
 
 0.545
GAP12570.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.511
GAP15133.1
Bacterial cell division membrane protein; Belongs to the SEDS family.
   
 
 0.510
GAP14067.1
N-acetylmuramoyl-L-alanine amidase.
    
  0.487
GAP15048.1
Hypothetical protein.
   
 
  0.463
GAP14757.1
Protein containg bacterial SH3 domain.
   
 
  0.461
GAP13081.1
Glucose-1-phosphate adenylyltransferase.
    
  0.405
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
  0.405
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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