STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP12604.1ABC-type multidrug transport system, ATPase and permease component. (592 aa)    
Predicted Functional Partners:
GAP14552.1
ATPases of the AAA+ class.
   
 0.937
GAP15217.1
Hypothetical protein.
 
 
 
  0.928
GAP12676.1
Protein containg AAA ATPase domain.
   
  0.916
GAP15606.1
Polyketide synthase module.
  
 0.902
GAP14480.1
N-acetylglutamate synthase.
  
 0.868
GAP12631.1
ABC-type multidrug transport system, ATPase component.
  
0.839
GAP12550.1
ABC-type multidrug transport system, ATPase component.
  
 
0.817
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.816
GAP14121.1
ABC-type multidrug transport system, ATPase component.
  
 
0.814
GAP15138.1
ABC-type multidrug transport system, ATPase component.
  
 
0.814
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.