STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP12616.1Uncharacterized protein conserved in bacteria. (156 aa)    
Predicted Functional Partners:
GAP15134.1
TIGR01777 family protein.
  
    0.796
GAP13611.1
NADH(P)-binding protein.
   
    0.780
GAP13372.1
Tagatose-1,6-bisphosphate aldolase.
   
    0.537
GAP12615.1
FAD/FMN-containing dehydrogenases.
       0.528
GAP12553.1
Methylase.
  
 
  0.467
GAP12364.1
Protein containg methyltransferase domain.
   
 
  0.449
GAP12444.1
Methylase.
   
 
  0.449
GAP12847.1
Protein containg methyltransferase domain.
   
 
  0.449
GAP12885.1
Protein containg methyltransferase domain.
   
 
  0.449
GAP12890.1
Protein containg methyltransferase domain.
   
 
  0.449
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.