STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP12695.1ABC-type multidrug transport system, ATPase component. (300 aa)    
Predicted Functional Partners:
GAP15284.1
ABC-2 family transporter protein.
 
 0.981
GAP12693.1
ABC-2 family transporter protein.
  
 0.978
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.833
atpA
Proton translocating ATP synthase, F1 alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.824
GAP12604.1
ABC-type multidrug transport system, ATPase and permease component.
  
 
0.813
GAP16138.1
ABC-type multidrug transport system, ATPase and permease component.
  
 
0.812
GAP13100.1
ABC-type multidrug transport system, ATPase and permease component.
   
 
0.803
GAP13101.1
ABC-type multidrug transport system, ATPase and permease component.
   
  0.803
GAP13383.1
ABC-type multidrug transport system, ATPase and permease component.
   
 
0.803
GAP13690.1
ABC-type multidrug transport system, ATPase and permease component.
   
 
0.803
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.