STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP12722.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
GAP14437.1
Uridine kinase.
  
 
  0.842
GAP13978.1
Fe-S oxidoreductase.
    
 0.840
GAP12403.1
Nucleoside-diphosphate-sugar pyrophosphorylase.
  
 
 0.729
GAP14776.1
Mannose-6-phosphate isomerase, type 1.
  
 
 0.701
GAP14085.1
Riboflavin kinase/FMN adenylyltransferase; Belongs to the ribF family.
   
 0.699
GAP12723.1
Hypothetical protein.
       0.689
GAP14341.1
Beta-phosphoglucomutase.
  
 
 0.669
GAP14384.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3.
  
 
 0.630
GAP14848.1
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.623
GAP13466.1
Glycosyltransferase.
  
 0.603
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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