STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP12775.1Predicted hydrolase. (271 aa)    
Predicted Functional Partners:
GAP12819.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
  
 
  0.820
GAP13444.1
Acyl carrier protein.
    
  0.761
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.761
GAP16095.1
Acyl carrier protein.
    
  0.761
GAP13808.1
Predicted hydrolase.
  
     0.756
GAP13317.1
Predicted hydrolase.
  
     0.752
GAP15606.1
Polyketide synthase module.
  
 0.717
GAP13919.1
Predicted hydrolase.
  
     0.704
GAP14439.1
Glycine cleavage system T protein; Belongs to the GcvT family.
   
 0.682
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
  0.677
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.