STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP12870.1FKBP-type peptidyl-prolyl cis-trans isomerases 1. (428 aa)    
Predicted Functional Partners:
htpG
Molecular chaperone, HSP90 family; Molecular chaperone. Has ATPase activity.
   
 0.999
GAP13088.1
Peptidyl-prolyl cis-trans isomerase.
 
 0.994
GAP14805.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
 0.994
GAP12676.1
Protein containg AAA ATPase domain.
   
 0.992
dinB
Nucleotidyltransferase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
 
  
 
 0.981
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.966
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.966
GAP13356.1
Aspartate kinase; Belongs to the aspartokinase family.
    
   0.963
GAP13541.1
Hypothetical protein.
   
 0.961
GAP13542.1
Hypothetical protein.
   
 0.961
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.