Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAP12425.1 | GAP12498.1 | LARV_00160 | LARV_00233 | LPXTG-site transpeptidase. | Predicted integral membrane protein. | 0.420 |
GAP12425.1 | GAP12917.1 | LARV_00160 | LARV_00657 | LPXTG-site transpeptidase. | Hypothetical protein. | 0.478 |
GAP12425.1 | GAP13534.1 | LARV_00160 | LARV_01289 | LPXTG-site transpeptidase. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.602 |
GAP12425.1 | GAP13538.1 | LARV_00160 | LARV_01293 | LPXTG-site transpeptidase. | Replicative DNA helicase. | 0.710 |
GAP12425.1 | GAP13546.1 | LARV_00160 | LARV_01301 | LPXTG-site transpeptidase. | Hypothetical protein. | 0.667 |
GAP12425.1 | GAP13547.1 | LARV_00160 | LARV_01302 | LPXTG-site transpeptidase. | Protein containg PglZ domain. | 0.649 |
GAP12498.1 | GAP12425.1 | LARV_00233 | LARV_00160 | Predicted integral membrane protein. | LPXTG-site transpeptidase. | 0.420 |
GAP12498.1 | GAP12917.1 | LARV_00233 | LARV_00657 | Predicted integral membrane protein. | Hypothetical protein. | 0.604 |
GAP12498.1 | GAP13546.1 | LARV_00233 | LARV_01301 | Predicted integral membrane protein. | Hypothetical protein. | 0.401 |
GAP12498.1 | GAP13547.1 | LARV_00233 | LARV_01302 | Predicted integral membrane protein. | Protein containg PglZ domain. | 0.739 |
GAP12498.1 | GAP15701.1 | LARV_00233 | LARV_03493 | Predicted integral membrane protein. | Predicted cobalamin binding protein. | 0.417 |
GAP12732.1 | GAP12917.1 | LARV_00468 | LARV_00657 | Regulator of chromosome condensation (RCC1) repeat. | Hypothetical protein. | 0.545 |
GAP12917.1 | GAP12425.1 | LARV_00657 | LARV_00160 | Hypothetical protein. | LPXTG-site transpeptidase. | 0.478 |
GAP12917.1 | GAP12498.1 | LARV_00657 | LARV_00233 | Hypothetical protein. | Predicted integral membrane protein. | 0.604 |
GAP12917.1 | GAP12732.1 | LARV_00657 | LARV_00468 | Hypothetical protein. | Regulator of chromosome condensation (RCC1) repeat. | 0.545 |
GAP12917.1 | GAP12918.1 | LARV_00657 | LARV_00658 | Hypothetical protein. | N-acetylglutamate synthase. | 0.592 |
GAP12917.1 | GAP13534.1 | LARV_00657 | LARV_01289 | Hypothetical protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.554 |
GAP12917.1 | GAP13538.1 | LARV_00657 | LARV_01293 | Hypothetical protein. | Replicative DNA helicase. | 0.563 |
GAP12917.1 | GAP13546.1 | LARV_00657 | LARV_01301 | Hypothetical protein. | Hypothetical protein. | 0.581 |
GAP12917.1 | GAP13547.1 | LARV_00657 | LARV_01302 | Hypothetical protein. | Protein containg PglZ domain. | 0.612 |
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