STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13026.1Saccharopine dehydrogenase. (367 aa)    
Predicted Functional Partners:
GAP15820.1
Saccharopine dehydrogenase.
  
     0.662
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 
 0.614
GAP14118.1
Uncharacterized protein conserved in bacteria.
 
     0.613
GAP13716.1
Lecithin:cholesterol acyltransferase.
  
     0.608
GAP13024.1
Streptomycin adenylyltransferase.
 
     0.596
GAP13027.1
Hypothetical protein.
       0.596
GAP13876.1
NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
  
 
 0.580
GAP15742.1
Acetaldehyde dehydrogenase.
  
 
 0.580
GAP13025.1
Hypothetical protein.
       0.572
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
   
 
 0.555
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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