STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13095.1ComEC/Rec2-related protein. (729 aa)    
Predicted Functional Partners:
GAP14995.1
Predicted amidophosphoribosyltransferase.
 
  
 0.946
GAP14688.1
Type IV leader peptidase family.
 
  
 0.880
GAP14401.1
DNA protecting protein DprA.
 
  
 0.877
GAP14910.1
Histidine kinase.
  
  
 0.863
GAP13515.1
Four helix bundle protein.
  
  
 0.812
GAP14292.1
Mg chelatase-related protein.
 
  
 0.801
GAP13836.1
Histidine kinase.
  
    0.796
GAP13585.1
Protein containg PAS domain S-box.
  
  
 0.751
GAP15972.1
Protein containg PAS domain S-box.
  
    0.748
GAP12400.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
   
 
 0.713
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.