STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13147.1Predicted dehydrogenase. (346 aa)    
Predicted Functional Partners:
GAP15044.1
Nucleoside-diphosphate-sugar epimerase.
   
 
  0.916
GAP13145.1
Sugar phosphate isomerase/epimerase.
 
 
 0.912
GAP14495.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.896
GAP13148.1
Threonine dehydrogenase.
 
 
  0.884
GAP12673.1
Sugar phosphate isomerase/epimerase.
 
 
 0.832
GAP15641.1
Predicted pyridoxal phosphate-dependent enzyme; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.826
GAP12666.1
Sugar phosphate isomerase/epimerase.
 
 
 0.822
GAP13149.1
Predicted metal-dependent hydrolase with the TIM-barrel fold.
 
     0.819
GAP13150.1
Glucose-6-phosphate isomerase.
 
    0.796
GAP15560.1
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.795
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.