STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13363.1Predicted acetyltransferase. (176 aa)    
Predicted Functional Partners:
GAP12918.1
N-acetylglutamate synthase.
  
     0.641
GAP13362.1
Transcriptional regulator, Crp/Fnr family.
       0.592
GAP15395.1
ABC-type transport system.
  
     0.494
GAP13364.1
Hybrid cluster protein-associated redox disulfide domain.
       0.482
GAP13365.1
Hypothetical protein.
       0.482
GAP13024.1
Streptomycin adenylyltransferase.
  
     0.464
GAP12572.1
N-acetylglutamate synthase.
  
     0.452
GAP12654.1
Predicted aminoglycoside phosphotransferase.
  
     0.428
GAP13361.1
Uncharacterized conserved protein.
       0.424
GAP13360.1
Protein containg methyltransferase domain.
       0.403
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.