STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13473.1Predicted glycosyltransferases. (297 aa)    
Predicted Functional Partners:
GAP13476.1
Predicted glycosyltransferases.
 
 
0.986
GAP13436.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 0.938
GAP15207.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.932
GAP13471.1
Glycosyltransferase.
 
  
 0.928
GAP13474.1
Glycosyltransferase.
 
    0.833
GAP13475.1
O-antigen ligase like membrane protein.
  
  
 0.830
GAP13472.1
Glycosyltransferase.
 
    0.813
GAP13470.1
Uncharacterized protein, LmbE homolog.
       0.778
GAP13945.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.752
GAP13478.1
Glycosyltransferase.
    
 0.735
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.