STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase, Arthrobacter type; Belongs to the xylose isomerase family. (388 aa)    
Predicted Functional Partners:
xylB
Xylulokinase.
 
 
 0.972
xylB-2
D-xylulose kinase.
 
 
 0.932
GAP12738.1
Sugar (pentulose and hexulose) kinase.
  
 
 0.910
GAP15239.1
Predicted dehydrogenase.
    
 0.879
GAP14967.1
Fructokinase.
    
 0.863
GAP13020.1
Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
    
 0.855
GAP14239.1
Transcriptional regulator/sugar kinase.
    
 0.850
GAP13572.1
Beta-glucosidase-related glycosidase.
 
  
 0.842
GAP15912.1
Sugar (pentulose and hexulose) kinase.
  
 
 0.838
GAP13142.1
Sugar kinase, ribokinase family; Belongs to the carbohydrate kinase PfkB family.
     
 0.832
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
Server load: low (22%) [HD]