STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13588.1DNA-binding ferritin-like protein; Belongs to the Dps family. (180 aa)    
Predicted Functional Partners:
GAP12424.1
Peroxiredoxin, OsmC subfamily.
  
  
 0.828
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
    0.788
GAP12479.1
Multimeric flavodoxin WrbA.
  
  
 0.782
GAP15784.1
Multimeric flavodoxin WrbA.
  
  
 0.782
GAP14133.1
Glutaredoxin-like domain protein.
 
  
 0.607
GAP13589.1
Hypothetical protein.
       0.584
GAP13593.1
Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family.
 
  
 0.522
GAP12819.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
    
 
 0.520
GAP14972.1
Copper chaperone.
  
  
 0.461
GAP14574.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
    
 
 0.459
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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