STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13602.1Predicted membrane protein. (297 aa)    
Predicted Functional Partners:
GAP13601.1
Predicted permease.
 
    0.832
GAP13600.1
Predicted permease.
 
    0.830
GAP13603.1
Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
 
    0.703
GAP14602.1
Calcium/proton exchanger; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.
  
    0.696
GAP13604.1
Membrane-associated phospholipid phosphatase.
       0.579
GAP13599.1
Hypothetical protein.
       0.578
GAP13593.1
Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family.
 
    0.483
GAP13357.1
Aspartate semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family.
   
 
 0.469
GAP13605.1
DNA-binding ferritin-like protein; Belongs to the Dps family.
  
    0.440
GAP15936.1
Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
 
    0.418
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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