STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13646.1Protein containg 4Fe-4S dicluster domain. (160 aa)    
Predicted Functional Partners:
GAP14296.1
Formate dehydrogenase, alpha subunit, archaeal-type; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 0.984
GAP14931.1
NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit.
  
 0.981
GAP15907.1
NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
 0.981
GAP14054.1
Fe-S-cluster-containing hydrogenase components 1.
 
  
 0.968
GAP12819.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
  
 
 0.964
GAP15944.1
Protein containg PAS domain S-box.
   
 
 0.963
GAP14859.1
Thioredoxin reductase.
  
 
 0.937
GAP13702.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 0.933
GAP13652.1
NADH:ubiquinone oxidoreductase 27 kD subunit.
  
 
 0.921
GAP13649.1
Membrane bound hydrogenase subunit mbhJ.
  
 
 0.915
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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