STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13690.1ABC-type multidrug transport system, ATPase and permease component. (587 aa)    
Predicted Functional Partners:
GAP14552.1
ATPases of the AAA+ class.
   
 0.937
GAP14335.1
ABC-type cobalt transport system, ATPase component.
 
   
 
0.936
GAP12676.1
Protein containg AAA ATPase domain.
   
  0.916
GAP15606.1
Polyketide synthase module.
  
 0.902
GAP14108.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.900
GAP14480.1
N-acetylglutamate synthase.
  
 0.868
GAP15394.1
ABC-type antimicrobial peptide transport system, ATPase component.
 
     
0.860
GAP12631.1
ABC-type multidrug transport system, ATPase component.
  
0.839
GAP12550.1
ABC-type multidrug transport system, ATPase component.
  
  0.830
GAP15217.1
Hypothetical protein.
 
 
 
  0.827
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.