STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13744.1Beta-lactamase class C and other penicillin binding proteins. (391 aa)    
Predicted Functional Partners:
GAP13742.1
Beta-glucosidase-related glycosidase.
 
 0.994
GAP13735.1
Uncharacterized protein conserved in bacteria.
    0.986
anmK
N-acetylmuramic acid 6-phosphate etherase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
     0.908
GAP13746.1
Predicted N-acetylglucosamine kinase.
 
    0.902
GAP13343.1
Lysophospholipase L1.
    
 0.901
GAP13743.1
Predicted acetyltransferase.
 
     0.808
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.729
GAP13747.1
N-acetylglucosamine 6-phosphate deacetylase.
       0.666
GAP13748.1
Glutamine--fructose-6-phosphate transaminase.
       0.634
GAP13709.1
Predicted esterase.
    
 0.582
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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