STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13765.1Methylase. (247 aa)    
Predicted Functional Partners:
GAP14439.1
Glycine cleavage system T protein; Belongs to the GcvT family.
  
 0.859
GAP13354.1
Methylase.
  
 
  0.698
GAP15606.1
Polyketide synthase module.
  
 0.692
GAP16132.1
Methylase.
  
 
  0.687
GAP13419.1
Mg-chelatase subunit ChlD.
   
 0.640
GAP12553.1
Methylase.
  
 
  0.591
GAP15484.1
Predicted unusual protein kinase.
   
 
 0.565
GAP14415.1
Methylase.
  
 
  0.560
GAP14478.1
Methylase.
  
 
  0.543
GAP13766.1
Hypothetical protein.
       0.542
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.