STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13831.1Beta-lactamase class C and other penicillin binding proteins. (455 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.729
GAP13735.1
Uncharacterized protein conserved in bacteria.
    0.589
GAP13742.1
Beta-glucosidase-related glycosidase.
 
 
 0.567
GAP13830.1
Hypothetical protein.
       0.525
GAP14096.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.525
GAP15111.1
Predicted metal-dependent hydrolase with the TIM-barrel fold.
 
     0.486
GAP13493.1
Beta-glucosidase-related glycosidase.
  
 
 0.478
GAP13572.1
Beta-glucosidase-related glycosidase.
  
 
 0.478
GAP14233.1
Beta-glucosidase-related glycosidase.
  
 
 0.478
GAP14790.1
Beta-glucosidase-related glycosidase.
  
 
 0.478
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.