STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13837.1Protein containg ParB-like nuclease domain. (152 aa)    
Predicted Functional Partners:
GAP15418.1
Predicted phosphoesterases, related to the Icc protein.
 
     0.794
GAP13817.1
ABC-type Fe3+ transport system, permease component.
  
     0.636
GAP13816.1
ABC transporter periplasmic binding protein, thiB subfamily.
  
     0.613
GAP13836.1
Histidine kinase.
 
    0.603
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
  
 0.592
GAP15977.1
Chloride channel protein EriC.
  
  
 0.491
GAP15154.1
Pyrimidine-nucleoside phosphorylase.
   
    0.474
GAP16058.1
O-6-methylguanine DNA methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
  
    0.469
GAP13922.1
O-6-methylguanine DNA methyltransferase.
   
    0.465
GAP15165.1
Zinc-binding alcohol dehydrogenase family protein.
  
 
  0.463
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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