STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13904.1Cation diffusion facilitator family transporter. (310 aa)    
Predicted Functional Partners:
GAP14900.1
Hypothetical protein.
   
 0.811
GAP12538.1
Predicted flavoprotein.
  
    0.794
GAP15486.1
Hypothetical protein.
   
    0.792
GAP12431.1
Magnesium-translocating P-type ATPase.
    
 0.719
GAP12515.1
Plasma-membrane proton-efflux P-type ATPase.
    
 0.719
GAP12996.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
    
 0.719
GAP13082.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
    
 0.719
GAP13587.1
Magnesium-translocating P-type ATPase.
    
 0.719
GAP15713.1
Cation transport ATPase.
    
 0.719
GAP16038.1
Ferrous iron transporter FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
     
 0.599
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.