Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAP12488.1 | GAP13924.1 | LARV_00223 | LARV_01683 | Predicted O-methyltransferase. | Predicted endonuclease containing a URI domain. | 0.831 |
GAP12488.1 | rsmI | LARV_00223 | LARV_01923 | Predicted O-methyltransferase. | Probable S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.776 |
GAP12488.1 | rsmI-2 | LARV_00223 | LARV_03323 | Predicted O-methyltransferase. | Probable S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.803 |
GAP13924.1 | GAP12488.1 | LARV_01683 | LARV_00223 | Predicted endonuclease containing a URI domain. | Predicted O-methyltransferase. | 0.831 |
GAP13924.1 | GAP13925.1 | LARV_01683 | LARV_01684 | Predicted endonuclease containing a URI domain. | Prephenate dehydrogenase. | 0.806 |
GAP13924.1 | GAP13926.1 | LARV_01683 | LARV_01685 | Predicted endonuclease containing a URI domain. | Zn-dependent protease. | 0.813 |
GAP13924.1 | GAP13927.1 | LARV_01683 | LARV_01686 | Predicted endonuclease containing a URI domain. | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase. | 0.437 |
GAP13924.1 | GAP13928.1 | LARV_01683 | LARV_01687 | Predicted endonuclease containing a URI domain. | tRNA threonylcarbamoyl adenosine modification protein YjeE. | 0.401 |
GAP13924.1 | rsmI | LARV_01683 | LARV_01923 | Predicted endonuclease containing a URI domain. | Probable S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.632 |
GAP13924.1 | rsmI-2 | LARV_01683 | LARV_03323 | Predicted endonuclease containing a URI domain. | Probable S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.632 |
GAP13925.1 | GAP13924.1 | LARV_01684 | LARV_01683 | Prephenate dehydrogenase. | Predicted endonuclease containing a URI domain. | 0.806 |
GAP13925.1 | GAP13926.1 | LARV_01684 | LARV_01685 | Prephenate dehydrogenase. | Zn-dependent protease. | 0.845 |
GAP13925.1 | GAP13927.1 | LARV_01684 | LARV_01686 | Prephenate dehydrogenase. | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase. | 0.543 |
GAP13925.1 | GAP13928.1 | LARV_01684 | LARV_01687 | Prephenate dehydrogenase. | tRNA threonylcarbamoyl adenosine modification protein YjeE. | 0.411 |
GAP13926.1 | GAP13924.1 | LARV_01685 | LARV_01683 | Zn-dependent protease. | Predicted endonuclease containing a URI domain. | 0.813 |
GAP13926.1 | GAP13925.1 | LARV_01685 | LARV_01684 | Zn-dependent protease. | Prephenate dehydrogenase. | 0.845 |
GAP13926.1 | GAP13927.1 | LARV_01685 | LARV_01686 | Zn-dependent protease. | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase. | 0.453 |
GAP13926.1 | GAP13928.1 | LARV_01685 | LARV_01687 | Zn-dependent protease. | tRNA threonylcarbamoyl adenosine modification protein YjeE. | 0.412 |
GAP13927.1 | GAP13924.1 | LARV_01686 | LARV_01683 | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase. | Predicted endonuclease containing a URI domain. | 0.437 |
GAP13927.1 | GAP13925.1 | LARV_01686 | LARV_01684 | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase. | Prephenate dehydrogenase. | 0.543 |
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