Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAP12405.1 | GAP12784.1 | LARV_00140 | LARV_00520 | Aspartate/tyrosine/aromatic aminotransferase. | Shikimate kinase. | 0.493 |
GAP12405.1 | GAP13925.1 | LARV_00140 | LARV_01684 | Aspartate/tyrosine/aromatic aminotransferase. | Prephenate dehydrogenase. | 0.854 |
GAP12405.1 | hisC | LARV_00140 | LARV_03639 | Aspartate/tyrosine/aromatic aminotransferase. | Histidinol-phosphate aminotransferase; Belongs to the imidazoleglycerol-phosphate dehydratase family. | 0.867 |
GAP12784.1 | GAP12405.1 | LARV_00520 | LARV_00140 | Shikimate kinase. | Aspartate/tyrosine/aromatic aminotransferase. | 0.493 |
GAP12784.1 | GAP13925.1 | LARV_00520 | LARV_01684 | Shikimate kinase. | Prephenate dehydrogenase. | 0.728 |
GAP12784.1 | hisC | LARV_00520 | LARV_03639 | Shikimate kinase. | Histidinol-phosphate aminotransferase; Belongs to the imidazoleglycerol-phosphate dehydratase family. | 0.576 |
GAP13534.1 | GAP13923.1 | LARV_01289 | LARV_01682 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Adenine/guanine phosphoribosyltransferase. | 0.658 |
GAP13534.1 | GAP13925.1 | LARV_01289 | LARV_01684 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Prephenate dehydrogenase. | 0.725 |
GAP13534.1 | GAP14995.1 | LARV_01289 | LARV_02775 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Predicted amidophosphoribosyltransferase. | 0.778 |
GAP13534.1 | xpt | LARV_01289 | LARV_00649 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.658 |
GAP13923.1 | GAP13534.1 | LARV_01682 | LARV_01289 | Adenine/guanine phosphoribosyltransferase. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.658 |
GAP13923.1 | GAP13925.1 | LARV_01682 | LARV_01684 | Adenine/guanine phosphoribosyltransferase. | Prephenate dehydrogenase. | 0.808 |
GAP13923.1 | GAP14379.1 | LARV_01682 | LARV_02147 | Adenine/guanine phosphoribosyltransferase. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.658 |
GAP13923.1 | GAP14995.1 | LARV_01682 | LARV_02775 | Adenine/guanine phosphoribosyltransferase. | Predicted amidophosphoribosyltransferase. | 0.796 |
GAP13923.1 | xpt | LARV_01682 | LARV_00649 | Adenine/guanine phosphoribosyltransferase. | Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.829 |
GAP13924.1 | GAP13925.1 | LARV_01683 | LARV_01684 | Predicted endonuclease containing a URI domain. | Prephenate dehydrogenase. | 0.806 |
GAP13924.1 | GAP13926.1 | LARV_01683 | LARV_01685 | Predicted endonuclease containing a URI domain. | Zn-dependent protease. | 0.813 |
GAP13925.1 | GAP12405.1 | LARV_01684 | LARV_00140 | Prephenate dehydrogenase. | Aspartate/tyrosine/aromatic aminotransferase. | 0.854 |
GAP13925.1 | GAP12784.1 | LARV_01684 | LARV_00520 | Prephenate dehydrogenase. | Shikimate kinase. | 0.728 |
GAP13925.1 | GAP13534.1 | LARV_01684 | LARV_01289 | Prephenate dehydrogenase. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.725 |
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