STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14055.1Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (714 aa)    
Predicted Functional Partners:
GAP13704.1
Methyl-viologen-reducing hydrogenase, delta subunit/4Fe-4S dicluster domain.
  
 0.999
GAP14053.1
Polysulphide reductase.
 
 0.999
GAP14054.1
Fe-S-cluster-containing hydrogenase components 1.
 0.999
GAP14056.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
 
 0.999
GAP13972.1
Fe-S-cluster-containing hydrogenase components 2.
 
 0.997
GAP14051.1
Cytochrome c, mono- and diheme variants.
 
 0.997
GAP14052.1
Hypothetical protein.
  
 0.991
GAP13705.1
Coenzyme F420-reducing hydrogenase, beta subunit.
  
 0.987
GAP14011.1
Cytochrome c, mono- and diheme variants.
 
 0.986
GAP15190.1
Cytochrome c, mono- and diheme variants.
 
 0.986
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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