STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14066.1Uncharacterized protein conserved in bacteria. (375 aa)    
Predicted Functional Partners:
GAP14067.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.913
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.865
GAP14065.1
Uncharacterized protein conserved in bacteria.
 
    
0.833
GAP14003.1
Competence/damage-inducible protein CinA C-terminal domain; Belongs to the CinA family.
  
 
  0.797
GAP14437.1
Uridine kinase.
    
  0.756
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
    
 0.747
GAP13274.1
Hypothetical protein.
   
   0.703
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.695
GAP12732.1
Regulator of chromosome condensation (RCC1) repeat.
 
 
 
 0.685
GAP14213.1
Soluble lytic murein transglycosylase.
  
 
 0.678
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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