STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14096.1D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (357 aa)    
Predicted Functional Partners:
GAP15133.1
Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 
 0.787
GAP14278.1
Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family.
 
   
 0.696
GAP14282.1
Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.696
GAP12300.1
Cell division protein FtsI/penicillin-binding protein 2.
  
 
 0.643
GAP14875.1
Peptidoglycan glycosyltransferase.
  
 
 0.643
GAP12634.1
Serine/threonine protein kinase.
   
 
 0.626
GAP14601.1
Protein kinase domain.
   
 
 0.626
GAP14067.1
N-acetylmuramoyl-L-alanine amidase.
   
 
 0.620
GAP13396.1
Membrane proteins related to metalloendopeptidases.
  
 
 0.574
GAP12827.1
Membrane carboxypeptidase.
     
 0.571
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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