STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14110.1Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family. (248 aa)    
Predicted Functional Partners:
GAP14109.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.997
GAP14778.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.995
GAP14108.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.982
GAP14779.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.964
GAP14910.1
Histidine kinase.
   
 0.937
GAP15066.1
Protein containg PAS domain S-box.
  
 0.920
GAP13585.1
Protein containg PAS domain S-box.
   
 0.916
GAP14816.1
Signal transduction histidine kinase.
   
 0.902
GAP12367.1
Signal transduction histidine kinase.
 
 
 0.901
GAP12368.1
Histidine kinase.
  
 
 0.901
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.