STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14125.1Myo-inositol-1-phosphate synthase. (360 aa)    
Predicted Functional Partners:
GAP15140.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.917
GAP12533.1
Archaeal fructose-1,6-bisphosphatase; Belongs to the inositol monophosphatase superfamily.
  
 
 0.877
GAP14126.1
Predicted xylanase/chitin deacetylase.
       0.792
GAP16133.1
Superfamily II DNA/RNA helicase, SNF2 family.
    
   0.782
GAP14127.1
Diadenosine tetraphosphate (Ap4A) hydrolase.
       0.771
purH
IMP cyclohydrolase.
    
   0.622
GAP14129.1
Membrane proteins related to metalloendopeptidases.
       0.590
GAP14130.1
Membrane proteins related to metalloendopeptidases.
       0.582
GAP14128.1
Membrane proteins related to metalloendopeptidases.
       0.555
GAP14131.1
Permease of the major facilitator superfamily.
       0.490
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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