STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14196.1NADH:ubiquinone oxidoreductase subunit 2. (464 aa)    
Predicted Functional Partners:
nuoD
NADH:ubiquinone oxidoreductase 49 kD subunit 7; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 0.997
GAP15447.1
NADH dehydrogenase subunit L.
 
 0.991
GAP15894.1
NADH dehydrogenase subunit L.
 
 0.991
GAP13647.1
NADH:ubiquinone oxidoreductase subunit 5.
  
 0.990
GAP14348.1
NADH:ubiquinone oxidoreductase subunit 5.
  
 0.990
GAP15278.1
NADH dehydrogenase subunit L.
  
 0.990
GAP13650.1
Formate hydrogenlyase subunit 4.
  
 0.987
GAP14351.1
Formate hydrogenlyase subunit 4.
  
 0.987
GAP13653.1
Ni,Fe-hydrogenase III large subunit.
  
 
 0.980
GAP14354.1
Ni,Fe-hydrogenase III large subunit.
  
 
 0.980
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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