STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14295.1DNA-binding transcriptional activator of the SARP family. (658 aa)    
Predicted Functional Partners:
GAP12440.1
Predicted flavin-nucleotide-binding protein.
  
     0.746
GAP13165.1
Transglutaminase-like enzyme, putative cysteine protease.
 
     0.724
GAP15780.1
Transcriptional regulator.
  
  
 0.691
GAP14905.1
Protein containg PAS domain S-box.
 
    0.662
GAP13331.1
Protein containg DNA binding domain, excisionase family.
  
     0.648
GAP16117.1
Hypothetical protein.
  
     0.643
GAP15385.1
Dihydroorotate dehydrogenase.
  
     0.621
GAP12389.1
Hypothetical protein.
  
     0.599
GAP13433.1
Patatin.
  
     0.598
GAP14393.1
Periplasmic component of the Tol biopolymer transport system.
  
     0.591
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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