STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14341.1Beta-phosphoglucomutase. (948 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.885
GAP13631.1
Maltose-binding periplasmic protein.
  
  
 0.873
GAP14433.1
Maltose-binding periplasmic protein.
  
  
 0.873
GAP12856.1
Glucoamylase.
     
 0.868
GAP13629.1
ABC-type maltose transport systems, permease component.
  
  
 0.857
GAP14435.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  
 0.857
GAP13466.1
Glycosyltransferase.
  
 
 0.852
GAP13370.1
Predicted kinase.
  
    0.824
GAP13978.1
Fe-S oxidoreductase.
    
  0.810
GAP14003.1
Competence/damage-inducible protein CinA C-terminal domain; Belongs to the CinA family.
    
  0.795
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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