STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14628.1Dolichyl-phosphate-mannose-protein mannosyltransferase. (510 aa)    
Predicted Functional Partners:
GAP14630.1
Hypothetical protein.
 
   
 0.907
GAP14627.1
Hypothetical protein.
       0.805
GAP14629.1
Hypothetical protein.
       0.795
GAP13400.1
Protein containg TPR repeat.
 
     0.765
GAP14767.1
Protein containg TPR repeat.
  
     0.746
GAP15455.1
Hypothetical protein.
 
     0.732
GAP14740.1
Predicted NTPase.
  
     0.731
GAP15195.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
     0.717
GAP14737.1
Bacterial membrane protein YfhO.
  
     0.702
GAP14735.1
Bacterial membrane protein YfhO.
  
     0.693
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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