STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14629.1Hypothetical protein. (538 aa)    
Predicted Functional Partners:
GAP14627.1
Hypothetical protein.
       0.802
GAP14628.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
       0.795
GAP14630.1
Hypothetical protein.
     
 0.759
GAP14626.1
Hypothetical protein.
  
    0.552
GAP14624.1
4-amino-4-deoxy-L-arabinose transferase.
       0.547
GAP14625.1
Hypothetical protein.
       0.547
GAP14631.1
Histidine kinase.
       0.526
GAP15947.1
Lauroyl/myristoyl acyltransferase.
    
 0.491
GAP14675.1
Hypothetical protein.
    
  0.452
GAP14632.1
Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.
       0.429
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.