STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14637.1Predicted membrane protein. (151 aa)    
Predicted Functional Partners:
GAP14639.1
Uncharacterized protein conserved in bacteria.
 
     0.870
GAP14638.1
Nucleoside-diphosphate-sugar epimerase.
       0.825
GAP14634.1
RNA methyltransferase, RsmD family.
       0.822
GAP14636.1
Protoporphyrin IX magnesium-chelatase.
       0.788
GAP14635.1
uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
       0.773
GAP14463.1
Protein containg FOG: LysM repeat.
  
     0.624
GAP14067.1
N-acetylmuramoyl-L-alanine amidase.
 
     0.602
GAP14416.1
4-amino-4-deoxy-L-arabinose transferase.
 
   
 0.591
GAP14988.1
Hypothetical protein.
  
     0.588
GAP15583.1
Glycosyltransferase.
 
 
 0.561
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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