STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14679.1Uncharacterized membrane protein. (373 aa)    
Predicted Functional Partners:
GAP15256.1
Dinucleotide-utilizing enzyme.
    
  0.837
GAP13704.1
Methyl-viologen-reducing hydrogenase, delta subunit/4Fe-4S dicluster domain.
   
   0.765
GAP15386.1
2-polyprenylphenol hydroxylase.
  
 
 0.743
GAP15940.1
Sulfide dehydrogenase (flavoprotein) subunit SudB.
  
 
 0.743
GAP14647.1
Cysteine sulfinate desulfinase/cysteine desulfurase.
  
  0.549
GAP15611.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
    
 0.526
GAP13887.1
Maltodextrin phosphorylase.
    
  0.480
GAP14224.1
Sulfur transfer protein.
    
  0.473
GAP14820.1
Rhodanese-related sulfurtransferase.
    
 0.468
GAP12487.1
Rubrerythrin.
  
  
 0.461
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.