STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14705.1Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase. (332 aa)    
Predicted Functional Partners:
fbiD
Phospholactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
 
   
 0.942
GAP14707.1
LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.941
GAP14709.1
Coenzyme F420-0 gamma-glutamyl ligase.
 
   
 0.926
GAP14710.1
Reduced coenzyme F420:NADP oxidoreductase.
 
    0.904
GAP14704.1
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
     0.842
GAP14439.1
Glycine cleavage system T protein; Belongs to the GcvT family.
     
 0.816
GAP14054.1
Fe-S-cluster-containing hydrogenase components 1.
   
 
 0.796
GAP14711.1
Putative selenium metabolism protein SsnA.
 
  
  0.781
GAP14859.1
Thioredoxin reductase.
    
 0.743
GAP13705.1
Coenzyme F420-reducing hydrogenase, beta subunit.
 
 
 0.711
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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