STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14711.1Putative selenium metabolism protein SsnA. (450 aa)    
Predicted Functional Partners:
GAP14703.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 
 0.838
GAP14149.1
Glutamate formiminotransferase.
   
 
 0.826
GAP14710.1
Reduced coenzyme F420:NADP oxidoreductase.
       0.822
GAP14709.1
Coenzyme F420-0 gamma-glutamyl ligase.
       0.785
GAP14705.1
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase.
 
  
  0.781
GAP13135.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 
 0.766
GAP14700.1
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
  
 
 0.760
GAP14704.1
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
 
  0.760
GAP14859.1
Thioredoxin reductase.
  
 
 0.750
GAP14708.1
2'-5' RNA ligase superfamily.
       0.745
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.