STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14746.1Cytochrome c biogenesis protein. (238 aa)    
Predicted Functional Partners:
GAP14774.1
Peroxiredoxin.
  
 0.979
GAP14974.1
Peroxiredoxin.
  
 0.978
GAP14009.1
Peroxiredoxin.
 
  
 0.859
GAP14014.1
ABC-type transport system.
  
  
 0.858
GAP14745.1
Predicted membrane protein.
       0.755
GAP14744.1
Uncharacterized protein, YfiH family; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.742
GAP14747.1
Uncharacterized protein conserved in bacteria.
       0.742
GAP14743.1
Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.737
GAP13258.1
Site-specific recombinases, DNA invertase Pin homologs.
   
    0.641
GAP16136.1
Site-specific recombinases, DNA invertase Pin homologs.
   
    0.641
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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