STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14747.1Uncharacterized protein conserved in bacteria. (366 aa)    
Predicted Functional Partners:
GAP15364.1
Beta-lactamase class A.
  
     0.766
GAP15200.1
Hypothetical protein.
  
     0.757
GAP13772.1
Capsule polysaccharide biosynthesis protein.
  
     0.750
GAP14128.1
Membrane proteins related to metalloendopeptidases.
  
     0.747
GAP14746.1
Cytochrome c biogenesis protein.
       0.742
GAP14416.1
4-amino-4-deoxy-L-arabinose transferase.
  
     0.735
GAP13934.1
Membrane protein.
  
     0.734
GAP14391.1
CARDB domain-containing protein.
  
     0.729
GAP13789.1
Capsule polysaccharide biosynthesis protein.
  
     0.717
GAP14744.1
Uncharacterized protein, YfiH family; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.710
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.