STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14784.1ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (525 aa)    
Predicted Functional Partners:
GAP14782.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 0.999
GAP14783.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.999
GAP12648.1
ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.998
GAP14772.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.998
GAP14785.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
0.998
GAP14773.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 0.997
GAP16074.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.997
GAP12647.1
ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.996
GAP16073.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 0.996
GAP16076.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
0.989
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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