STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14886.1Phage portal protein, SPP1 Gp6-like. (490 aa)    
Predicted Functional Partners:
GAP14882.1
Hypothetical protein.
       0.773
GAP14883.1
Hypothetical protein.
       0.773
GAP14884.1
Uncharacterized protein conserved in bacteria.
       0.773
GAP14885.1
Phage uncharacterized protein, C-terminal domain.
       0.773
GAP14887.1
Phage Mu protein F like protein.
       0.773
GAP14888.1
Hypothetical protein.
       0.773
GAP14880.1
Hypothetical protein.
       0.746
GAP14881.1
Hypothetical protein.
       0.746
GAP14889.1
Hypothetical protein.
       0.465
GAP14879.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
       0.462
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.