STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14921.1Predicted transcriptional regulator, contains C-terminal CBS domains. (324 aa)    
Predicted Functional Partners:
GAP14386.1
Anti-sigma regulatory factor.
  
 0.997
GAP14387.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
 0.997
GAP14920.1
Serine kinase of the HPr protein, regulates carbohydrate metabolism.
 
  
  0.971
GAP14922.1
Predicted transcriptional regulator containing CBS domains.
 
  
  0.962
GAP15945.1
Stage II sporulation protein E.
 
 0.954
GAP15665.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.953
GAP13836.1
Histidine kinase.
  
 0.931
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.920
GAP14385.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.906
GAP13749.1
Response regulator receiver domain/Stage II sporulation protein E.
  
 0.902
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.