STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14937.1Hydrogenase nickel incorporation protein HypB. (223 aa)    
Predicted Functional Partners:
hypA
Hydrogenase-3 nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.999
GAP14940.1
Hydrogenase maturation protein HypD.
 
  
 0.992
GAP14939.1
Hydrogenase maturation protein HypC.
 
  
 0.991
GAP15051.1
FKBP-type peptidyl prolyl cis-trans isomerase/Apo-metallochaperone SlyD.
    
 
 0.976
GAP14938.1
Hydrogenase maturation protein, carbamoyltransferase HypF.
 
   
 0.967
GAP13652.1
NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 
 0.959
GAP14353.1
NADH:ubiquinone oxidoreductase 27 kD subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.
   
 
 0.959
GAP14941.1
Hydrogenase maturation protein, carbamoyl dehydratase HypE.
 
  
 0.959
GAP13653.1
Ni,Fe-hydrogenase III large subunit.
   
 
 0.900
GAP14354.1
Ni,Fe-hydrogenase III large subunit.
   
 
 0.900
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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