STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14992.1Flp pilus assembly protein, ATPase CpaF. (465 aa)    
Predicted Functional Partners:
GAP14993.1
Flp pilus assembly protein TadB.
 
  
 0.987
GAP14994.1
Flp pilus assembly protein TadC.
 
  
 0.966
GAP14991.1
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
  
 0.959
GAP14990.1
Flp pilus assembly protein CpaB.
  
  
 0.742
GAP13201.1
Flp pilus assembly protein TadB.
  
  
 0.599
GAP13202.1
Flp pilus assembly protein TadB.
  
  
 0.599
GAP14989.1
Flp pilus assembly protein, pilin Flp.
  
  
 0.574
GAP14230.1
Predicted ATPase with chaperone activity.
 
     0.573
GAP15973.1
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 0.565
GAP14995.1
Predicted amidophosphoribosyltransferase.
       0.517
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.